{"id":4903,"date":"2021-01-20T09:26:15","date_gmt":"2021-01-20T08:26:15","guid":{"rendered":"https:\/\/ukazky.euweb.cz\/?page_id=4903"},"modified":"2023-02-11T17:27:15","modified_gmt":"2023-02-11T17:27:15","slug":"polyploid-establishment","status":"publish","type":"page","link":"https:\/\/web.natur.cuni.cz\/botanika\/certner\/polyploid-establishment\/","title":{"rendered":"Origin and establishment of polyploids"},"content":{"rendered":"\n<div class=\"wp-block-columns alignwide are-vertically-aligned-center is-layout-flex wp-container-core-columns-is-layout-9d6595d7 wp-block-columns-is-layout-flex\">\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\" style=\"flex-basis:75%\">\n<p class=\"has-text-align-left\">Polyploidization (whole-genome duplication) is among the most important evolutionary forces driving the diversification of flowering plants. By providing an almost instantaneous reproductive isolation of polyploid mutants from diploid progenitors, polyploidization has been widely acknowledged as the most frequent mode of sympatric speciation. Additionally, polyploidization brings genetic and phenotypic novelty, some of which is already apparent in first-generation polyploid mutants, though it remains unclear whether the new traits may increase their adaptive potential or facilitate their establishment in diploid progenitors\u2019 populations. Polyploids tend to originate recurrently and many plant species retain individuals of two or more different ploidy levels in certain parts of their distributional range of even within their populations.<\/p>\n\n\n\n<p><mark style=\"background-color:rgba(0, 0, 0, 0)\" class=\"has-inline-color has-vivid-red-color\"><strong>In our research, we aim to elucidate the key evolutionary mechanisms operating at various stages of polyploid speciation, which are important for the potential evolutionary success of polyploid lineages:<\/strong><\/mark><\/p>\n<\/div>\n<\/div>\n\n\n\n<div style=\"height:20px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n\n\n\n<div class=\"wp-block-columns alignwide are-vertically-aligned-center is-layout-flex wp-container-core-columns-is-layout-9d6595d7 wp-block-columns-is-layout-flex\">\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\" style=\"flex-basis:75%\">\n<h3 class=\"wp-block-heading\">Rates of polyploid origin in natural populations and their environmental and genetic determinants<\/h3>\n\n\n\n<p>The dominant pathways of polyploid formation involve gametes with somatic chromosome number (i.e., unreduced gametes, 2<em>n<\/em> gametes) that occur in natural populations because of meiotic errors. First-generation tetraploid mutants may either directly result from a fusion of two unreduced gametes of diploids, or a single unreduced gamete may produce a triploid intermediate that can give rise to tetraploid offspring in crosses with diploids and\/or other triploids (i.e., the triploid bridge mechanism). Generally, the rates of gametic non-reduction are very low (&lt; 1% of produced gametes), though increased rates may be observed if plants are experiencing environmental stress, and natural populations may also contain individuals genetically predisposed for (heritable) high 2<em>n<\/em>-gamete production.<\/p>\n\n\n\n<p><mark style=\"background-color:rgba(0, 0, 0, 0)\" class=\"has-inline-color has-vivid-red-color\">We are interested in the patterns of 2<em>n<\/em> gamete production in natural populations occurring along environmental gradients, in the relative importance of genetic and environmental factors (incl. the genotype \u00d7 environment interaction), and in genetic architecture of 2<em>n<\/em> gamete production (and whether it can be generalised across populations and species).<\/mark><\/p>\n\n\n\n<p>To infer the rates of 2<em>n<\/em> gametes we are using flow cytometry (FCM) of field-collected pollen samples. This technique allows rapid and cost-effective simultaneous analysis of thousands of nuclei per flower and thus reaching robust estimates of 2<em>n<\/em> gamete frequency. An overview of the currently used protocols and some best practices guidelines for pollen FCM can be found in this <a rel=\"noreferrer noopener\" href=\"https:\/\/doi.org\/10.1002\/cyto.a.24330\" target=\"_blank\">review article<\/a> prepared in collaboration with the <a rel=\"noreferrer noopener\" href=\"https:\/\/www.husbandlab.ca\/index.html\" target=\"_blank\">Husband lab<\/a> (University of Guelph, Canada) and the <a rel=\"noreferrer noopener\" href=\"https:\/\/ucpages.uc.pt\/flowerlab\/\" target=\"_blank\">FLOWer lab<\/a> (University of Coimbra, Portugal).<\/p>\n\n\n\n<figure class=\"wp-block-image size-full is-resized\"><img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/FCM_2n_gametes.png\" alt=\"\" class=\"wp-image-5484\" width=\"653\" height=\"301\" srcset=\"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/FCM_2n_gametes.png 900w, https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/FCM_2n_gametes-300x139.png 300w, https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/FCM_2n_gametes-768x355.png 768w\" sizes=\"auto, (max-width: 653px) 100vw, 653px\" \/><figcaption class=\"wp-element-caption\"><em>Fluorescence histograms of pollen nuclei from binucleate (a) and trinucleate (b) angiosperm pollen obtained with propidium iodide FCM. The presence of unreduced gametes is indicated by the red-highlighted peaks. More details can be found in the original article (<a href=\"https:\/\/doi.org\/10.1002\/cyto.a.24330\" target=\"_blank\" rel=\"noreferrer noopener\">link<\/a>).<\/em><\/figcaption><\/figure>\n\n\n\n<p>Obtaining direct estimates of the actual rate with which new polyploid mutants emerge in natural populations is, on the other hand, quite challenging. The early-generation polyploid mutants first need to be distinguished from their long-established polyploid counterparts (and inter-ploidy hybrids) and application of molecular markers is usually not compatible with the sample size required. In the scentless mayweed (<em>Tripleurospermum inodorum<\/em>), one of our studied mixed-ploidy species, we leveraged the existing 19% difference in monoploid genome size between diploids and tetraploids (enabling the easy distinction 3x and 4x mutants solely based on their nuclear DNA content in routine FCM ploidy screening) to provide the first robust estimates of the rate of spontaneous polyploidization in a plant species. Polyploid mutants were extremely rare among the 11,018 individuals screened across 1,209 <em>T. inodorum<\/em> populations and accounted for 0.04% of samples. They never formed uniform populations but occurred solitarily, without any sign of their local establishment and further spread (<a href=\"https:\/\/doi.org\/10.1093\/aob\/mcx032\" target=\"_blank\" rel=\"noreferrer noopener\">original article<\/a>).<\/p>\n<\/div>\n<\/div>\n\n\n\n<div style=\"height:20px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n\n\n\n<div class=\"wp-block-columns alignwide are-vertically-aligned-center is-layout-flex wp-container-core-columns-is-layout-9d6595d7 wp-block-columns-is-layout-flex\">\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\" style=\"flex-basis:75%\">\n<h3 class=\"wp-block-heading\">Conditions favouring local establishment of polyploid mutants in diploid progenitors\u2019 populations<\/h3>\n\n\n\n<p>While the probability of spontaneous polyploidization in natural populations should increase under higher rates of 2<em>n<\/em> gamete production, new polyploid mutants are facing a strong demographic disadvantage that usually leads to their extirpation in progenitors\u2019 populations. &#8230;<\/p>\n\n\n\n<figure class=\"wp-block-image size-full is-resized\"><img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Slavkac_mapa.png\" alt=\"\" class=\"wp-image-5503\" width=\"750\" height=\"419\" srcset=\"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Slavkac_mapa.png 1000w, https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Slavkac_mapa-300x167.png 300w, https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Slavkac_mapa-768x429.png 768w\" sizes=\"auto, (max-width: 750px) 100vw, 750px\" \/><figcaption class=\"wp-element-caption\"><em>Cytotype distribution patterns at the serpentine locality in W Czechia, where progenitor <mark style=\"background-color:rgba(0, 0, 0, 0)\" class=\"has-inline-color has-vivid-red-color\">diploids<\/mark> of <\/em>Knautia serpentinicola<em> coexist with their recently derived <mark style=\"background-color:rgba(0, 0, 0, 0)\" class=\"has-inline-color has-vivid-cyan-blue-color\">autotetraploid<\/mark> descendants.<\/em><\/figcaption><\/figure>\n\n\n\n<div style=\"height:10px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n\n\n\n<figure class=\"wp-block-image size-full is-resized\"><img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Knautia_experim.png\" alt=\"\" class=\"wp-image-5504\" width=\"528\" height=\"235\" srcset=\"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Knautia_experim.png 850w, https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Knautia_experim-300x133.png 300w, https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Knautia_experim-768x342.png 768w\" sizes=\"auto, (max-width: 528px) 100vw, 528px\" \/><figcaption class=\"wp-element-caption\"><em>Caption &#8230; <\/em><\/figcaption><\/figure>\n<\/div>\n<\/div>\n\n\n\n<div style=\"height:20px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n\n\n\n<div class=\"wp-block-columns alignwide are-vertically-aligned-center is-layout-flex wp-container-core-columns-is-layout-9d6595d7 wp-block-columns-is-layout-flex\">\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\" style=\"flex-basis:75%\">\n<h3 class=\"wp-block-heading\">Phenotypic novelty originating as a direct consequence of whole-genome duplication and its putative adaptive potential<\/h3>\n\n\n\n<p>Text &#8230;<\/p>\n\n\n\n<figure class=\"wp-block-image size-full\"><img loading=\"lazy\" decoding=\"async\" width=\"1000\" height=\"558\" src=\"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Slavkac_mapa.png\" alt=\"\" class=\"wp-image-5503\" srcset=\"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Slavkac_mapa.png 1000w, https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Slavkac_mapa-300x167.png 300w, https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Slavkac_mapa-768x429.png 768w\" sizes=\"auto, (max-width: 1000px) 100vw, 1000px\" \/><figcaption class=\"wp-element-caption\"><em>Caption &#8230; <\/em><\/figcaption><\/figure>\n<\/div>\n<\/div>\n\n\n\n<div style=\"height:20px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n\n\n\n<div class=\"wp-block-columns alignwide are-vertically-aligned-center is-layout-flex wp-container-core-columns-is-layout-9d6595d7 wp-block-columns-is-layout-flex\">\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\" style=\"flex-basis:75%\">\n<h3 class=\"wp-block-heading\">(In-)stability of diploid \u2013 polyploid coexistence within populations and contact zones<\/h3>\n\n\n\n<p>Text &#8230;<\/p>\n\n\n\n<figure class=\"wp-block-image size-large is-resized\"><img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/TIPS_obrazek-1024x875.png\" alt=\"\" class=\"wp-image-5505\" width=\"574\" height=\"490\" srcset=\"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/TIPS_obrazek-1024x875.png 1024w, https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/TIPS_obrazek-300x256.png 300w, https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/TIPS_obrazek-768x656.png 768w, https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/TIPS_obrazek.png 1200w\" sizes=\"auto, (max-width: 574px) 100vw, 574px\" \/><figcaption class=\"wp-element-caption\"><em>Caption &#8230; <\/em><\/figcaption><\/figure>\n\n\n\n<figure class=\"wp-block-image size-full is-resized\"><img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Tripleuro_fotka.png\" alt=\"\" class=\"wp-image-5507\" width=\"222\" height=\"248\" srcset=\"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Tripleuro_fotka.png 715w, https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Tripleuro_fotka-268x300.png 268w\" sizes=\"auto, (max-width: 222px) 100vw, 222px\" \/><figcaption class=\"wp-element-caption\"><em>Caption &#8230; <\/em><\/figcaption><\/figure>\n\n\n\n<figure class=\"wp-block-image size-full is-resized\"><img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Tripl_temporal_dynamics.png\" alt=\"\" class=\"wp-image-5508\" width=\"482\" height=\"414\" srcset=\"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Tripl_temporal_dynamics.png 800w, https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Tripl_temporal_dynamics-300x258.png 300w, https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-content\/uploads\/2023\/01\/Tripl_temporal_dynamics-768x660.png 768w\" sizes=\"auto, (max-width: 482px) 100vw, 482px\" \/><figcaption class=\"wp-element-caption\"><em>Caption &#8230; <\/em><\/figcaption><\/figure>\n<\/div>\n<\/div>\n\n\n\n<div style=\"height:100px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n","protected":false},"excerpt":{"rendered":"<p>Polyploidization (whole-genome duplication) is among the most important evolutionary forces driving the diversification of flowering plants. By providing an almost instantaneous reproductive isolation of polyploid mutants from diploid progenitors, polyploidization has been widely acknowledged as the most frequent mode of sympatric speciation. Additionally, polyploidization brings genetic and phenotypic novelty, some of which is already apparent [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_uag_custom_page_level_css":"","footnotes":""},"class_list":["post-4903","page","type-page","status-publish","hentry"],"uagb_featured_image_src":{"full":false,"thumbnail":false,"medium":false,"medium_large":false,"large":false,"1536x1536":false,"2048x2048":false},"uagb_author_info":{"display_name":"CertnerM","author_link":"https:\/\/web.natur.cuni.cz\/botanika\/certner\/author\/certnerm\/"},"uagb_comment_info":0,"uagb_excerpt":"Polyploidization (whole-genome duplication) is among the most important evolutionary forces driving the diversification of flowering plants. By providing an almost instantaneous reproductive isolation of polyploid mutants from diploid progenitors, polyploidization has been widely acknowledged as the most frequent mode of sympatric speciation. Additionally, polyploidization brings genetic and phenotypic novelty, some of which is already apparent&hellip;","_links":{"self":[{"href":"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-json\/wp\/v2\/pages\/4903","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-json\/wp\/v2\/comments?post=4903"}],"version-history":[{"count":16,"href":"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-json\/wp\/v2\/pages\/4903\/revisions"}],"predecessor-version":[{"id":5714,"href":"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-json\/wp\/v2\/pages\/4903\/revisions\/5714"}],"wp:attachment":[{"href":"https:\/\/web.natur.cuni.cz\/botanika\/certner\/wp-json\/wp\/v2\/media?parent=4903"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}