Molecular phylogenetics and taxonomy - Lectures

 

Links: SIS, moodle, Plan of lectures 2023

2. 10. 2023 - Introduction, systematics, phylogenetics, homology, charachters, molecular characters (Vladimír Hampl)

presentation power point icon, audio record , Text for studying (Czech only) pdf

9. 10. 2023 - Sequence alignment (Marián Novotný)

presentation power point icon, audio record

16. 10. 2023 - Introduction, systematics, phylogenetics, homology, charachters, molecular characters (Vladimír Hampl)

presentation power point icon, audio record

23. 10. 2023 - Other methods to obtain molecular data (Vladimír Hampl)

presentation power point icon, audio record , Text for studying (Czech only) pdf

30. 10. 2023 - Genetic distances (Vladimír Hampl)

presentation power point icon, audio record , Text for studying (Czech only) pdf

6. 11. 2023 - Distances, introduction to trees, UPGMA (Vladimír Hampl)

presentation power point icon, audio record , Text for studying (Czech only) pdf

13. 11. 2023 - Rate heterogenetity in time and position, Maximum parsimony (Vladimír Hampl)

presentation power point icon, audio record , Text for studying (Czech only) pdf

20. 11. 2023 - Maximum likelihood and Bayesian methods (Vladimír Hampl)

presentation power point icon, audio record , Text for studying (Czech only) pdf

27. 11. 2023 - Support of branching, topology tests (Vladimír Hampl)

presentation power point icon, audio record , Text for studying (Czech only) pdf

4. 12. 2023 - Model tests, molecular clock (Vladimír Hampl)

presentation power point icon, audio record , Text for studying (Czech only) pdf

11. 12. 2023 - Barcoding and forensic science (Vladimír Hampl)

presentation power point icon, audio record

18. 12. 2023 - Intraspecific relationships (Vladimír Hampl)

presentation power point icon, audio record

 

  Molecular phylogenetics and taxonomy - Practicals

Practical No. 1

Part 1: Sequence Retrieval

Part 2: Sequence Alignment

Practical No. 2

Part 3: Biological Sequence Phylogenies

Practical No. 3

Part 4: Multigene phylogenetics

Part 5: Testing phylogenies

Practical No. 4

Part 6: Molecular clocks

Practical No. 5

Part 7: Metagenomics