2023
Di Carluccio C., Milanesi F., Civera M., Abreu C., Sattin S., Francesconi O., Molinaro A., Vaněk O., Marchetti R., Silipo A. (2023): Tumor carbohydrate associated antigen analogs as potential binders for Siglec-7. Eur J Org Chem 26, e202300644. IF 3.261, DOI: 10.1002/ejoc.202300644
2022
Anderluh M., Berti F., Bzducha-Wróbel A., Chiodo F., Colombo C., Compostella F., Durlik K., Ferhati X., Holmdahl R., Jovanovic D., Kaca W., Lay L., Marinovic-Cincovic M., Marradi M., Ozil M., Polito L., Reina-Martin J. J., Reis C. A., Sackstein R., Silipo A., Švajger U., Vaněk O., Yamamoto F., Richichi B., van Vliet S. J. (2022): Recent advances on smart glycoconjugate vaccines in infections and cancer. FEBS J 289, 4251–4303. IF 5.622 DOI: 10.1111/febs.15909
Vaněk O., Kalousková B., Abreu C., Nejadebrahim S., Skořepa O. (2022): Natural killer cell-based strategies for immunotherapy of cancer. Adv Protein Chem Struct Biol 129, 91-133. IF 5.447 DOI: 10.1016/bs.apcsb.2022.02.001
Remans K., Lebendiker M., Abreu C., Maffei M., Sellathurai S., May M. M., Vaněk O., de Marco A. (2022): Protein purification strategies must consider downstream applications and individual biological characteristics. Microb Cell Fact 21, 52. IF 6.352 DOI: 10.1186/s12934-022-01778-5
Bláha J., Skálová T., Kalousková B., Skořepa O., Cmunt D., Grobárová V., Pazicky S., Poláchová E., Abreu C., Stránský J., Kovaľ T., Dušková J., Zhao Y., Harlos K., Hašek J., Dohnálek J., Vaněk O. (2022): Structure of the human NK cell NKR-P1:LLT1 receptor:ligand complex reveals clustering in the immune synapse. Nat Commun 13, 5022. IF 17.694 DOI: 10.1038/s41467-022-32577-6
2021
Stehlík Š., Henych J., Štenclová P., Král R., Zemenová P., Pangrác J., Vaněk O., Kromka A., Rezek B. (2021): Size and nitrogen inhomogeneity in detonation and laser synthesized primary nanodiamond particles revealed via salt-assisted deaggregation. Carbon 171, 230-239. IF 11.307 DOI: 10.1016/j.carbon.2020.09.026
Zouharová M., Vymětal J., Bednárová L., Vaněk O., Herman P., Vetýšková V., Poštulková K., Lingstaadas P. S., Vondrášek J., Boušová K. (2021): Intrinsically disordered protein domain of human ameloblastin in synthetic fusion with calmodulin increases calmodulin stability and modulates its function. Int J Biol Macromol 168, 1-12. IF 8.025 DOI: 10.1016/j.ijbiomac.2020.11.216
Stehlík Š., Mermoux M., Schummer B., Vaněk O., Kolářová K., Štenclová P., Vlk A., Ledinský M., Pfeifer R., Romanyuk O., Gordeev I., Roussel-Dherbey F., Němečková Z., Henych J., Bezdička P., Kromka A., Rezek B. (2021): Size effects on surface chemistry and Raman spectra of sub-5 nm oxidized high-pressure high-temperature and detonation nanodiamonds. J Phys Chem C 125, 5647-5669. IF 4.177 DOI: 10.1021/acs.jpcc.0c09190
Anderluh M., Berti F., Bzducha-Wróbel A., Chiodo F., Colombo C., Compostella F., Durlik K., Ferhati X., Holmdahl R., Jovanovic D., Kaca W., Lay L., Marinovic-Cincovic M., Marradi M., Ozil M., Polito L., Reina-Martin J. J., Reis C. A., Sackstein R., Silipo A., Švajger U., Vaněk O., Yamamoto F., Richichi B., van Vliet S. J. (2021): Emerging glyco-based strategies to steer immune responses. FEBS J 288, 4746-4772. IF 5.622 DOI: 10.1111/febs.15830
Peleg Y., Vincentelli R., Collins B. M., Chen K., Livingstone E. K., Weeratunga S., Leneva N., Guo Q., Remans K., Perez K., Bjerga G. E. K., Larsen Ø., Vaněk O., Skořepa O., Jacquemin S., Poterszman A., Kjaer S., Christodoulou E., Albeck S., Dym O., Ainbinder E., Unger T., Schuetz A., Matthes S., Bader M., de Marco A., Storici P., Semrau M. S., Stolt-Bergner P., Aigner C., Suppmann S., Goldenzweig A., Fleishman S. J. (2021): Community-wide experimental evaluation of the PROSS stability-design method. J Mol Biol 433, 166964. IF 6.151 DOI: 10.1016/j.jmb.2021.166964
López-Méndez B., Baron B., Brautigam C. A., Jowitt T. A., Knauer S. H., Uebel S., Williams M. A., Sedivy A., Abian O., Abreu C., Adamczyk M., Bal W., Berger S., Buell A. K., Carolis C., Daviter T., Fish A., Garcia-Alai M., Guenther C., Hamacek J., Holková J., Houser J., Johnson C., Kelly S., Leech A., Mas C., Matulis D., McLaughlin S. H., Montserret R., Nasreddine R., Nehmé R., Nguyen Q., Ortega-Alarcón D., Perez K., Pirc K., Piszczek G., Podobnik M., Rodrigo N., Rokov-Plavec J., Schaefer S., Sharpe T., Southall J., Staunton D., Tavares P., Vaněk O., Weyand M., Wu D. (2021): Reproducibility and accuracy of microscale thermophoresis in the NanoTemper Monolith: a multi laboratory benchmark study. Eur Biophys J 50, 411-427. IF 2.095 DOI: 10.1016/10.1007/s00249-021-01532-6
Boušová K., Bednárová L., Zouharová M., Vetýšková V., Poštulková K., Hofbauerová K., Petrvalská O., Vaněk O., Tripsianes K., Vondrášek J. (2021): The order of PDZ3 and TrpCage in fusion chimeras determines their properties – a biophysical characterization. Protein Sci 30, 1653-1666. IF 6.993 DOI: 10.1002/pro.4107
Kalousková B., Skořepa O., Cmunt D., Abreu C., Krejčová K., Bláha J., Sieglová I., Král V., Fábry M., Pola R., Pechar M., Vaněk O. (2021): Tumor marker B7-H6 bound to the coiled coil peptide-polymer conjugate enables targeted therapy by activating human natural killer cells. Biomedicines 9, 1597. IF 4.757 DOI: 10.3390/biomedicines9111597
2020
Janisova L., Gruzinov A., Zaborova O. V., Velychkivska N., Vaněk O., Chytil P., Etrych T., Janoušková O., Zhang X., Blanchet C., Papadakis C. M., Svergun D. I., Filippov S. K. (2020): Molecular mechanisms of the interactions of N-(2-hydroxypropyl)methacrylamide copolymers designed for cancer therapy with the blood plasma proteins. Pharmaceutics 12, 106. IF 6.321 DOI: 10.3390/pharmaceutics12020106
Skořepa O., Pažický S., Kalousková B., Bláha J., Abreu C., Ječmen T., Rosůlek M., Fish A., Sedivy A., Harlos K., Dohnálek J., Skálová T., Vaněk O. (2020): Natural killer cell activation receptor NKp30 oligomerization depends on its N-glycosylation. Cancers 12, 1998. IF 6.639 DOI: 10.3390/cancers12071998
Sumová P., Polanská N., Leštinová T., Spitzová T., Kalousková B., Vaněk O., Volf P., Rohoušová I. (2020): Phlebotomus perniciosus recombinant salivary proteins polarize murine macrophages towards the anti-inflammatory phenotype. Front Cell Infect Microbiol 10, 427. IF 5.293 DOI: 10.3389/fcimb.2020.00427
Vetýšková V., Zouharová M., Bednárová L., Vaněk O., Sázelová P., Kašička V., Vymětal J., Srp J., Rumlová M., Charnavets T., Poštulková K., Reseland J. E., Boušová K., Vondrášek J. (2020): Characterization of AMBN I and II isoforms and study of their Ca2+-binding properties. Int J Mol Sci 21, 9293. IF 5.923 DOI: 10.3390/ijms21239293
Skálová T., Lengálová A., Dohnálek J., Harlos K., Mihalčin P., Kolenko P., Stráňava M., Bláha J., Shimizu T., Martínková M. (2020): Disruption of the dimerization interface of the sensing domain in the dimeric heme-based oxygen sensor AfGcHK abolishes bacterial signal transduction. J Biol Chem 295, 1587-1597. IF 5,157 DOI: 10.1074/jbc.RA119.011574
2019
Sumová P., Šíma M., Kalousková B., Polanská N., Vaněk O., Oliveira F., Valenzuela J. G., Volf P. (2019): Amine-binding properties of salivary yellow-related proteins in phlebotomine sand flies. Insect Biochem Mol Biol 115, 103245. IF 3.827 DOI: 10.1016/j.ibmb.2019.103245
Willen L., Leštinová T., Kalousková B., Sumová P., Spitzová T., Velez R., Domenech E., Vaněk O., Gállego M., Mertens P., Volf P. (2019): Field study of the improved rapid sand fly exposure test in areas endemic for canine leishmaniasis. PLoS Negl Trop Dis 13, e0007832. IF 3.885 DOI: 10.1371/journal.pntd.0007832
Vaněk O., Celadová P., Skořepa O., Bláha J., Kalousková B., Dvorská A., Poláchová E., Pucholtová H., Kavan D., Pompach P., Hofbauerová K., Kopecký V. Jr., Mesci A., Voigt S., Carlyle J. R. (2019): Production of recombinant soluble dimeric C-type lectin-like receptors of rat natural killer cells. Sci Rep 9, 17836. IF 3.998 DOI: 10.1038/s41598-019-52114-8
2018
Škerlová J., Bláha J., Pachl P., Hofbauerová K., Kukačka Z., Man P., Pompach P., Novák P., Otwinowski Z., Brynda J., Vaněk O.*, Řezáčová P. (2018): Crystal structure of native β-N-acetylhexosaminidase isolated from Aspergillus oryzae sheds light onto its substrate specificity, high stability, and regulation by propeptide. FEBS J 285, 580-598. IF 4.739 DOI: 10.1111/febs.14360
Malý M., Skálová T., Švecová L., Dohnálek J., Bláha J., Vaněk O., Harlos K., Kolenko P. (2018): Paired refinement: Impact of reintegration and rescaling. In: Dragounová K., ed. Sborník 8. Studentské vědecké konference fyziky pevných látek a materiálů FJFI ČVUT. Praha: České vysoké učení technické v Praze, s. 8-10. ISBN 978-80-01-06511-2
2017
Bláha J., Kalousková B., Skořepa O., Pažický S., Novák P., Vaněk O. (2017): High-level expression and purification of soluble form of human natural killer cell receptor NKR-P1 in HEK293S GnTI– cells. Protein Expr Purif 140, 36-43. IF 1.338 DOI: 10.1016/j.pep.2017.07.016
Stehlík Š., Varga M., Štenclová P., Ondič L., Ledinský M., Pangrác J., Vaněk O., Lipov J., Kromka A., Rezek B. (2017): Ultrathin Nanocrystalline Diamond Films with Silicon Vacancy Color Centers via Seeding by 2 nm Detonation Nanodiamonds. ACS Appl Mater Interfaces 9, 38842-38853. IF 8.097 DOI: 10.1021/acsami.7b14436
Stráňava M., Man P., Skálová T., Kolenko P., Bláha J., Fojtíková V., Martínek V., Dohnálek J., Lengálová A., Rosůlek M., Shimizu T., Martínková M. (2017): Coordination and redox state-dependent structural changes of the heme-based oxygen sensor AfGcHK associated with intraprotein signal transduction. J Biol Chem 292, 20921-20935. IF 4.011 DOI: 10.1074/jbc.M117.817023
2016
Doležal M., Zábranský A., Dostál J., Vaněk O., Brynda J., Lepšík M., Hadravová R., Pichová I. (2016): Myristoylation drives dimerization of matrix protein from mouse mammary tumor virus. Retrovirology 13, 2. IF 3.867 DOI: 10.1186/s12977-015-0235-8
Stráňava M., Martínek V., Man P., Fojtíková V., Kavan D., Vaněk O., Shimizu T., Martínková M. (2016): Structural Characterization of the Heme-based Oxygen Sensor, AfGcHK, its Interactions with the Cognate Response Regulator, and their Combined Mechanism of Action in a Bacterial Two-component Signaling System. Proteins 84, 1375-1389. IF 2.289 DOI: 10.1002/prot.25083
2015
Bláha J., Pachl P., Novák P., Vaněk O. (2015): Expression and purification of soluble and stable ectodomain of natural killer cell receptor LLT1 through high-density transfection of suspension adapted HEK293S GnTI– cells. Protein Expr Purif 109, 7-13. IF 1.407 DOI: 10.1016/j.pep.2015.01.006
Skálová T., Bláha J., Harlos K., Dušková J., Kovaľ T., Stránský J., Hašek J., Vaněk O., Dohnálek J. (2015): Four crystal structures of human LLT1, a ligand for human NKR-P1, in varied glycosylation and oligomerization states. Acta Crystallogr Sect D Biol Crystallogr 71, 578-591. IF 2.512 DOI: 10.1107/S1399004714027928
Machová I., Snášel J., Dostál J., Brynda J., Fanfrlík J., Singh M., Tarábek J., Vaněk O., Bednárová L., Pichová I. (2015): Structural and functional studies of phosphoenolpyruvate carboxykinase from Mycobacterium tuberculosis. PLoS ONE 10, e0120682. IF 3.057 DOI: 10.1371/journal.pone.0120682
Lynn G. M., Laga R., Darrah P. A., Ishizuka A. S., Balaci A. J., Dulcey A. E., Pechar M., Pola R., Gerner M. Y., Yamamoto A., Buechler C. R., Quinn K. M., Smelkinson M. G., Vaněk O., Cawood R., Hills T., Vasalatiy O., Kastenmüller K., Francica J. R., Stutts L., Tom J. K., Ryu K. A., Esser-Kahn A. P., Etrych T., Fisher K. D., Seymour L. W., Seder R. A. (2015): In vivo characterization of the physicochemical properties of polymer-linked TLR agonists that enhance vaccine immunogenicity. Nat Biotechnol 33, 1201-1210. IF 43.113 DOI: 10.1038/nbt.3371