Molecular phylogenetics and taxonomy - Lectures
Links: SIS, moodle, Plan of lectures 2024
30. 9. 2024 - Alignment (Marián Novotný)
presentation 
, audio record 2023 
7. 10. 2024 - Databases and searches in them (Marián Novotný)
presentation , audio record 2023
14. 10. 2024 - Introduction, systematics, phylogenetics, homology, charachters, molecular characters (Vladimír Hampl)
presentation , audio record 2024 , Text for studying (Czech only) 
21. 10. 2024 - Other methods to obtain molecular data (Vladimír Hampl)
presentation , audio record 2024 , Text for studying (Czech only)
4. 11. 2024 - Calculation of genetic distances (Vladimír Hampl)
presentation , audio record 2024 , Text for studying (Czech only)
11. 11. 2024 - Protein distances, construction of trees from the distance data (Vladimír Hampl)
presentation , audio record 2024 , Text for studying (Czech only)
18. 11. 2024 - Site rate heterogeneity, search of tree space, maximum parsimony (Vladimír Hampl)
presentation , audio record 2024 , Text for studying (Czech only)
25. 11. 2024 - Maximum likelihood and Bayesian methods (Vladimír Hampl)
presentation , audio record 2024 , Text for studying (Czech only)
2. 12. 2024 - Bootstraping, testing of hypotheses (Vladimír Hampl)
presentation , audio record 2024 , Text for studying (Czech only)
9. 12. 2024 - Testing of models, molecular clock (Vladimír Hampl)
presentation , audio record 2024 , Text for studying (Czech only)
16. 12. 2024 - Metabarcoding, forensic science (Vladimír Hampl)
presentation , audio record 2024
6. 1. 2025 - Intraspecific relationships (Vladimír Hampl)
presentation , audio record 2024
Molecular phylogenetics and taxonomy - Practicals
Practical No. 1
Practical No. 2
Part 3: Biological Sequence Phylogenies
Practical No. 3
Part 4: Multigene phylogenetics
Practical No. 4
Practical No. 5