Genomics of speciation and adaptation 2/2 ZK/Z
Summer term 2019-2020
Garant:
[CLP] Clément Lafon Placette (Dpt of Botany)
Teachers:
[AKP] Ashish Kumar Pathak (Dpt of Botany)
[AM] Antonin Macháč (Center for Theoretical Studies)
[CLP] Clément Lafon Placette (Dpt of Botany)
[FK] Filip Kolář (Dpt of Botany)
[MB] Magdalena Bohutinská (Dpt of Botany)
[MP] Manon Poignet (Dpt of Zoology)
[NP] Nelida Padilla (Dpt of Botany)
[PS] Petr Smykal (Palacky University in Olomouc)
[RR] Radka Reifová (Dpt of Zoology)
[RS] Roswitha Schmickl (Dpt of Botany)
[SS] Stephen Schlebush (Dpt of Zoology)
[VK] Veronika Konečná (Dpt of Botany)
Time:
Lectures: on Tuesdays, from 13.10 to 14.40. Almost every week with few exceptions, check the schedule.
Practicals: on Wednesdays, from 13.10 to 16.10. Not every week, check the schedule.
Rooms:
Lectures: room “Kolokvium”, Benatska 2 , first door on your left when you enter the building.
Practicals: room B12 (Posluchárna OŽP), Benatska 2 , first floor up the stairs.
Schedule of lectures
18.2. | Introduction to speciation and hybridization barriers [CLP] | presentation |
25.2. | Sexual selection and speciation [CLP] | presentation |
3.3. | Evolution of intrinsic postzygotic isolation [RR] | presentation |
10.3. | Polyploid speciation [NP] | |
17.3. | Methodologies and concepts in population genomics and adaptomics [CLP] | |
24.3. | Speciation by domestication [PS] | |
31.3. | Local adaptation & Ecological speciation [FK] | |
7.4. | Secondary contact: species interactions and evolution of reproductive isolation [RR] | |
14.4. | Evolutionary consequences of gene flow between species: hybrid speciation, adaptive introgression [CLP] | |
21.4. | Speciation genomics methodologies: detecting interspecific gene flow [RR] | |
28.4. | Species in a macro-context: out of the gene-oriented view on speciation [AM] |
Schedule of practical classes
25.3. | Reminders on R [CLP] |
8.4. | Local adaptation/ecological speciation I. Genome scans searching for adaptation genes. [MB] + [VK] |
15.4. | Hybrid necrosis in Capsella. Revealing the genetic basis using a QTL approach. [AKP] + [CLP] |
22.4. | Reconstructing phylogeny despite hybridization (etc.). [RS] |
29.4. | Detecting gene flow between species. [RR] + [SS] + [MP] |
Summer term 2018-2019
Lectures: Clément Lafon Placette, Radka Reifová, Filip Kolář, Roswitha Schmickl, Antoním Macháč
Practicals: Camille Sottas, Gianluca Chimetto, Veronika Konečná
Time:
Lectures: on Tuesdays, from 13.00 to 14.30.
Practicals: on Wednesdays, from 13.00 to 16.00. Not every week.
Rooms:
Lectures: room “Kolokvium”, Benatska 2 , first door on your left when you enter the building.
Practicals: room B12 (Posluchárna OŽP), Benatska 2 , first floor up the stairs.
Schedule of lectures
19.2. | Introduction to speciation and hybridization barriers [CLP] | presentation | video |
26.2. | Cancelled | ||
5.3. | Postzygotic barriers, Bayeson-Dobzhansky-Müller incompatibilities, genomic conflicts [RR] | presentation | |
12.3. | Local adaptation & Ecological speciation [FK] | presentation | |
19.3. | Sexual selection and speciation [CLP] | presentation | |
26.3. | Methodologies and concepts in population genomics and adaptomics [CLP] | presentation | |
2.4. | Polyploid speciation [FK] | presentation | |
9.4. | Secondary contact: reinforcement and the role of interspecific competition in speciation [RR] | presentation | |
16.4. | Evolutionary consequences of gene flow between species: hybrid speciation, adaptive introgression [CLP] | ||
23.4. | Speciation genomics methodologies [RR] | presentation | |
30.4. | Cancelled | ||
7.5. | Species in a macro-context: out of the gene-oriented view on speciation [AM] |
Schedule of practical classes
27.3. | Reminders on R [CLP] |
3.4. | Genome scans searching for adaptation genes. [FK] + [VK] |
17.4. | Hybrid necrosis in Capsella. Revealing the genetic basis using a QTL approach. [GC] + [CLP] |
24.4. | Detecting gene flow between species. [RR] + [CS] |
15.5. | Reconstructing phylogeny despite hybridization (etc.). [RS] |