Publications

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Snášel, J.; Nauš, P.; Dostál, J.; Hnízda, A.; Fanfrlík, J.; Brynda, J.; Bourderioux, A.; Dušek, M.; Dvořáková, H.; Stolaříková, J.; et al. Structural Basis for Inhibition of Mycobacterial and Human Adenosine Kinase by 7-Substituted 7-(Het)aryl-7-deazaadenine Ribonucleosides. Journal of Medicinal Chemistry 2014, 57 (20), 8268-8279 DOI: 10.1021/jm500497v.
Baszczynski, O.; Cigáň, M.; Filo, J.; Prochazkova, E. Sterically-Controlled Self-Immolation in Phosphoramidate Linkers Triggered by Light. European Journal of Organic Chemistry 2020, 2020 (7), 897-906 DOI: 10.1002/ejoc.201901882.
Beier, P.; Janecký, L.; Klepetářová, B.; Markos, A.; Pohl, R. Stereoselective synthesis of (Z)-β-enamido fluorides from N-fluoroalkyl- and N-sulfonyl-1,2,3-triazoles. Organic Letters 2021, 23 (11), 4224-4227.
Markos, A.; Voltrova, S.; Motornov, V.; Tichy, D.; Klepetářová, B.; Beier, P. Stereoselective Synthesis of (Z)-beta-Enamido Triflates and Fluorosulfonates from N-Fluoroalkylated Triazoles. Chemistry-a European Journal 2019, 25 (32), 7640-7644 DOI: 10.1002/chem.201901632.
Bobula, T.; Hocek, M.; Kotora, M. Sonogashira reactions of α- and β-1-ethynyl-2-deoxyribosides: synthesis of acetylene-extended C-nucleosides. Tetrahedron 2010, 66 (2), 530-536 DOI: 10.1016/j.tet.2009.11.030.
Dziuba, D.; Pospíšil, P.; Matyašovský, J.; Brynda, J.; Nachtigallová, D.; Rulíšek, L.; Pohl, R.; Hof, M.; Hocek, M. Solvatochromic fluorene-linked nucleoside and DNA as color-changing fluorescent probes for sensing interactions. Chem. Sci. 2016, 7 (9), 5775-5785 DOI: 10.1039/C6SC02548J.
Bursová, M.; Čabala, R.; Hložek, T.; Jelinek, I.; Štícha, M.; Tůma, P. Sensitive CE-MS method for monitoring of riociguat and desmethylriociguat levels in human serum. Electrophoresis 2020, 41 (18-19), 1564-1567 DOI: 10.1002/elps.202000135.
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Bednářová, E.; Colacino, E.; Lamaty, F.; Kotora, M. A Ruthenium Complex-Catalyzed Cyclotrimerization of Halodiynes with Nitriles. Synthesis of 2- and 3-Halopyridines. Advanced Synthesis & Catalysis 2016, 358 (12), 1916-1923 DOI: 10.1002/adsc.201600127.
Bastien, G.; Císařová, I.; Dračínský, M.; Hurtado, C. Santos; Kaleta, J.; Mašát, M.; Rogers, C. T.; Rončević, I.; Štoček, J. Radek. Regular Two-Dimensional Arrays of Surface-Mounted Molecular Switches: Switching Monitored by UV-vis and NMR Spectroscopy. Journal of the American Chemical Society 2020, 142 (20), 9337-9351 DOI: 10.1021/jacs.0c01753.
Dračínský, M.; Castaño, O.; Kotora, M.; Bouř, P. Rearrangement of Dewar Benzene Derivatives Studied by DFT. The Journal of Organic Chemistry 2010, 75 (3), 576-581 DOI: 10.1021/jo902065n.
Kulkarni, R.; Noda, Y.; Barange, D. Kumar; Kochergin, Y. S.; Lyu, P.; Balcarova, B.; Nachtigall, P.; Bojdys, M. J. Real-time optical and electronic sensing with a beta-amino enone linked, triazine-containing 2D covalent organic framework. Nature Communications 2019, 10, 3228 DOI: 10.1038/s41467-019-11264-z.
Kulkarni, R.; Noda, Y.; Barange, D. Kumar; Kochergin, Y. S.; Lyu, P.; Balcarova, B.; Nachtigall, P.; Bojdys, M. J. Real-time optical and electronic sensing with a beta-amino enone linked, triazine-containing 2D covalent organic framework. Nature Communications 2019, 10, 3228 DOI: 10.1038/s41467-019-11264-z.
Kulkarni, R.; Noda, Y.; Barange, D. Kumar; Kochergin, Y. S.; Lyu, P.; Balcarova, B.; Nachtigall, P.; Bojdys, M. J. Real-time optical and electronic sensing with a beta-amino enone linked, triazine-containing 2D covalent organic framework. Nature Communications 2019, 10, 3228 DOI: 10.1038/s41467-019-11264-z.
Prochazkova, E.; Navrátil, R.; Janeba, Z.; Roithová, J.; Baszczynski, O. Reactive cyclic intermediates in the ProTide prodrugs activation: trapping the elusive pentavalent phosphorane. Organic & Biomolecular Chemistry 2019, 17 (2), 315-320 DOI: 10.1039/c8ob02870b.
Bojdys, M. J.; Jeromenok, J.; Thomas, A.; Antonietti, M. Rational Extension of the Family of Layered, Covalent, Triazine-Based Frameworks with Regular Porosity. Advanced Materials 2010, 22 (19), 2202-2205 DOI: 10.1002/adma.200903436.
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Váňa, J.; Roithová, J.; Kotora, M.; Beran, P.; Rulíšek, L.; Kočovský, P. Proton Affinities of Organocatalysts Derived from Pyridine N-oxide. Croatica Chemica Acta 2014, 87 (4), 349-356 DOI: 10.5562/cca2447.
Beier, P.; Klimánková, I.; Košťál, V.; Motornov, V.; Tichy, D. Preparation of 1-Azido-2-Bromo-1,1,2,2-Tetrafluoroethane and Its Use in the Synthesis of N-Fluoroalkylated Nitrogen Heterocycles. Journal of Organic Chemistry 2020, 85 (17), 11482-11489 DOI: 10.1021/acs.joc.0c01610.
Bojdys, M. J.; Hasell, T.; Severin, N.; Jelfs, K. E.; Rabe, J. P.; Cooper, A. I. Porous organic cage crystals: characterising the porous crystal surface. Chemical Communications 2012, 48 (98), 11948 DOI: 10.1039/c2cc36602a.
Ren, S.; Bojdys, M. J.; Dawson, R.; Laybourn, A.; Khimyak, Y. Z.; Adams, D. J.; Cooper, A. I. Porous, Fluorescent, Covalent Triazine-Based Frameworks Via Room-Temperature and Microwave-Assisted Synthesis. Advanced Materials 2012, 24 (17), 2357-2361 DOI: 10.1002/adma.201200751.
Nakanishi, T.; Weber, J.; Bojdys, M. J.; Thomas, A. Polymeric Frameworks: Toward Porous Semiconductors; John Wiley & Sons, Inc.: Hoboken, NJ, USA, 2011; pp 119-154.
Mačková, M.; Boháčová, S.; Perlíková, P.; Slavětínská, L. Poštová; Hocek, M. Polymerase Synthesis and Restriction Enzyme Cleavage of DNA Containing 7-Substituted 7-Deazaguanine Nucleobases. ChemBioChem 2015, 16 (15), 2225-2236 DOI: 10.1002/cbic.201500315.
Baszczyňski, O.; Černý, J.; Čmoková, A.; Grobárová, V.; Kolařík, M.; Procházková, E.; Slapničková, M.; Štěpánek, O.; Zíková, A. Piperazine-Modified Ketoconazole Derivatives Show Increased Activity against Fungal and Trypanosomatid Pathogens. ChemMedChem 2022, 17 (21), nestránkováno.
Baszczyňski, O.; Gallardo, M. García; Procházková, E.; Šimon, P.; Tichotová, M. Phosphate-Based Self-Immolative Linkers for Tuneable Double Cargo Release. Chemistry - A European Journal 2021, 27 (50), 12763-12775.
Baszczyňski, O.; Cigáň, M.; Filo, J.; Májek, M.; Procházková, E.; Straka, M.; Šimon, P. Phosphate linkers with traceable cyclic intermediates for self-immolation detection and monitoring. Chemical Communications 2021, 57 (2), 211-214.
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Brown, T.; El-Sagheer, A. H.; Hocek, M.; Kellett, A.; Panattoni, A. Oxidative DNA Cleavage with Clip-Phenanthroline Triplex-Forming Oligonucleotide Hybrids. Chembiochem : a European journal of chemical biology 2020, 21 (7), 991-1000 DOI: 10.1002/cbic.201900670.
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