2024
RIP-seq reveals RNAs that interact with RNA polymerase and the primary sigma factor in bacteria
Authors: Viola Vaňková Hausnerová, Mahmoud Shoman, Dilip Kumar, Marek Schwarz, Martin Modrák, Jitka Jirát Matějčková, Eliška Mikesková, Silvia Neva, Anna Herrmannová, Michaela Šiková, Petr Halada, Iva Novotná, Petr Pajer, Leoš Shivaya Valášek, Martin Převorovský, Libor Krásný, Jarmila Hnilicová
Published: 2024 in Nucleic Acids Res
DOI: 10.1093/nar/gkae081
up to 2023
selected publications:
Ms1 RNA Interacts With the RNA Polymerase Core in Streptomyces coelicolor and Was Identified in Majority of Actinobacteria Using a Linguistic Gene Synteny Search
Authors: Viola Vaňková Hausnerová, Olga Marvalová, Michaela Šiková, Mahmoud Shoman, Jarmila Havelková, Milada Kambová, Martina Janoušková, Dilip Kumar, Petr Halada, Marek Schwarz, Libor Krásný, Jarmila Hnilicová, Josef Pánek
Published: 2022 in Front Microbiol
DOI: 10.3389/fmicb.2022.848536
Ms1 RNA increases the amount of RNA polymerase in Mycobacterium smegmatis
Authors: Michaela Šiková, Martina Janoušková, Olga Ramaniuk, Petra Páleníková, Jiří Pospíšil, Pavel Bartl, Agnieszka Suder, Petr Pajer, Pavla Kubičková, Ota Pavliš, Miluše Hradilová, Dragana Vítovská, Hana Šanderová, Martin Převorovský, Jarmila Hnilicová, Libor Krásný
Published: 2019 in Mol Microbiol
DOI: 10.1111/mmi.14159
Ms1, a novel sRNA interacting with the RNA polymerase core in mycobacteria
Authors: Jarmila Hnilicová, Jitka Jirát Matějčková, Michaela Šiková, Jiří Pospíšil, Petr Halada, Josef Pánek, Libor Krásný
Published: 2014 in Nucleic Acids Res
DOI: 10.1093/nar/gku793