Publications

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F
Hartman, T.; Herzig, V.; Buděšínský, M.; Jindřich, J.; Cibulka, R.; Kraus, T. Flavin–cyclodextrin conjugates: effect of the structure on the catalytic activity in enantioselective sulfoxidations. Tetrahedron: Asymmetry 2012, 23 (22–23), 1571-1583 DOI: 10.1016/j.tetasy.2012.10.017.
Hartman, T.; Herzig, V.; Buděšínský, M.; Jindřich, J.; Cibulka, R.; Kraus, T. Flavin–cyclodextrin conjugates: effect of the structure on the catalytic activity in enantioselective sulfoxidations. Tetrahedron: Asymmetry 2012, 23 (22–23), 1571-1583 DOI: 10.1016/j.tetasy.2012.10.017.
Kielkowski, P.; Cahová, H.; Pohl, R.; Hocek, M. Flexible double-headed cytosine-linked 2′-deoxycytidine nucleotides. Synthesis, polymerase incorporation to DNA and interaction with DNA methyltransferases. Bioorganic & Medicinal Chemistry 2016, 24 (6), 1268-1276 DOI: 10.1016/j.bmc.2016.01.057.
Ménová, P.; Dziuba, D.; Güixens-Gallardo, P.; Jurkiewicz, P.; Hof, M.; Hocek, M. Fluorescence Quenching in Oligonucleotides Containing 7-Substituted 7-Deazaguanine Bases Prepared by the Nicking Enzyme Amplification Reaction. Bioconjugate Chemistry 2015, 26 (2), 361-366 DOI: 10.1021/acs.bioconjchem.5b00006.
Ménová, P.; Dziuba, D.; Güixens-Gallardo, P.; Jurkiewicz, P.; Hof, M.; Hocek, M. Fluorescence Quenching in Oligonucleotides Containing 7-Substituted 7-Deazaguanine Bases Prepared by the Nicking Enzyme Amplification Reaction. Bioconjugate Chemistry 2015, 26 (2), 361-366 DOI: 10.1021/acs.bioconjchem.5b00006.
Herrmann, P.; Buděšínský, M.; Kotora, M. Formal Total Synthesis of (±)-Estrone and Zirconocene-Promoted Cyclization of 2-Fluoro-1,7-octadienes and Ru-Catalyzed Ring Closing Metathesis. The Journal of Organic Chemistry 2008, 73 (16), 6202-6206 DOI: 10.1021/jo800620d.
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Tsybizova, A.; Schröder, D.; Roithová, J.; Henke, A.; Šrogl, J. Gas-phase studies of copper catalyzed aerobic cross coupling of thiol esters and arylboronic acids: REACTION MECHANISMS. Journal of Physical Organic Chemistry 2014, 27 (3), 198-203 DOI: 10.1002/poc.3262.
Kubelka, T.; Slavětínská, L.; Hocek, M. A General Regioselective Approach to 2,4-Disubstituted Pyrimidin-5-yl C-2-Deoxyribonucleosides. Synthesis 2012, 44 (06), 953-965 DOI: 10.1055/s-0031-1289694.
Ćerňová, M.; Pohl, R.; Klepetářová, B.; Hocek, M. A General Regioselective Synthesis of 2,4-Diarylpyrimidines from 2- Thiouracil through Two Orthogonal Cross-Coupling Reactions. Synlett 2012, 23 (09), 1305-1308 DOI: 10.1055/s-0031-1290826.
Riedl, J.; Ménová, P.; Pohl, R.; Orság, P.; Fojta, M.; Hocek, M. GFP-like Fluorophores as DNA Labels for Studying DNA–Protein Interactions. The Journal of Organic Chemistry 2012, 77 (18), 8287-8293 DOI: 10.1021/jo301684b.
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Kamlar, M.; Bravo, N.; Alba, A. - N. R.; Hybelbauerová, S.; Císařová, I.; Vesely, J.; Moyano, A.; Rios, R. Highly Enantioselective Addition of 1-Fluoro-1-nitro(phenylsulfonyl)methane to α,β-Unsaturated Aldehydes. European Journal of Organic Chemistry 2010, 2010 (28), 5464-5470 DOI: 10.1002/ejoc.201000851.
Companyó, X.; Hejnová, M.; Kamlar, M.; Vesely, J.; Moyano, A.; Rios, R. Highly enantioselective fluoromalonate addition to α,β-unsaturated aldehydes. Tetrahedron Letters 2009, 50 (35), 5021-5024 DOI: 10.1016/j.tetlet.2009.06.092.
Číhalová, S.; Valero, G.; Schimer, J.; Humpl, M.; Dračínský, M.; Moyano, A.; Rios, R.; Vesely, J. Highly enantioselective organocatalytic cascade reaction for the synthesis of piperidines and oxazolidines. Tetrahedron 2011, 67 (46), 8942-8950 DOI: 10.1016/j.tet.2011.08.079.
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Gálisová, A.; Groborz, O.; Hájek, M.; Hrubý, M.; Jirák, D.; Kolouchová, K.; Sedláček, O.; Sticová, E.; Švec, P.; Trousil, J.; et al. Implant-forming polymeric 19F MRI-tracer with tunable dissolution. Journal of Controlled Release 2020, 327 (November), 50-60 DOI: 10.1016/j.jconrel.2020.07.026.
Gálisová, A.; Groborz, O.; Hájek, M.; Hrubý, M.; Jirák, D.; Kolouchová, K.; Sedláček, O.; Sticová, E.; Švec, P.; Trousil, J.; et al. Implant-forming polymeric 19F MRI-tracer with tunable dissolution. Journal of Controlled Release 2020, 327 (November), 50-60 DOI: 10.1016/j.jconrel.2020.07.026.
Machara, A.; Werner, L.; Endoma-Arias, M. Ann; D. Cox, P.; Hudlicky, T. Improved Synthesis of Buprenorphine from Thebaine and/or Oripavine via Palladium-Catalyzed N-Demethylation/Acylation and/or Concomitant O-Demethylation. Advanced Synthesis & Catalysis 2012, 354 (4), 613-626 DOI: 10.1002/adsc.201100807.
Raindlová, V.; Janoušková, M.; Slavíčková, M.; Perlíková, P.; Boháčová, S.; Milisavljevič, N.; Šanderová, H.; Benda, M.; Barvík, I.; Krásný, L.; et al. Influence of major-groove chemical modifications of DNA on transcription by bacterial RNA polymerases. Nucleic Acids Research 2016, 44 (7), 3000-3012 DOI: 10.1093/nar/gkw171.
Güixens-Gallardo, P.; Hocek, M.; Perlíková, P. Inhibition of non-templated nucleotide addition by DNA polymerases in primer extension using twisted intercalating nucleic acid modified templates. Bioorganic & Medicinal Chemistry Letters 2016, 26 (2), 288-291 DOI: 10.1016/j.bmcl.2015.12.034.
Sabat, N.; Slavětínská, L. Poštová; Hocek, M. Ir-catalyzed C–H silylations of phenyldeazapurines. Tetrahedron Letters 2015, 56 (49), 6860-6862 DOI: 10.1016/j.tetlet.2015.10.089.
Ghosh, K.; Perlíková, P.; Havlicek, V.; Yang, C.; Pohl, R.; Tloušťová, E.; Hodek, J.; Gurska, S.; Džubák, P.; Hajdúch, M.; et al. Isomeric Naphtho-Fused 7-Deazapurine Nucleosides and Nucleotides: Synthesis, Biological Activity, Photophysical Properties and Enzymatic Incorporation to Nucleic Acids. European Journal of Organic Chemistry 2018, No. 37, 5092-5108 DOI: 10.1002/ejoc.201800165.
Ghosh, K.; Perlíková, P.; Havlicek, V.; Yang, C.; Pohl, R.; Tloušťová, E.; Hodek, J.; Gurska, S.; Džubák, P.; Hajdúch, M.; et al. Isomeric Naphtho-Fused 7-Deazapurine Nucleosides and Nucleotides: Synthesis, Biological Activity, Photophysical Properties and Enzymatic Incorporation to Nucleic Acids. European Journal of Organic Chemistry 2018, No. 37, 5092-5108 DOI: 10.1002/ejoc.201800165.
Ghosh, K.; Perlíková, P.; Havlicek, V.; Yang, C.; Pohl, R.; Tloušťová, E.; Hodek, J.; Gurska, S.; Džubák, P.; Hajdúch, M.; et al. Isomeric Naphtho-Fused 7-Deazapurine Nucleosides and Nucleotides: Synthesis, Biological Activity, Photophysical Properties and Enzymatic Incorporation to Nucleic Acids. European Journal of Organic Chemistry 2018, No. 37, 5092-5108 DOI: 10.1002/ejoc.201800165.
Ghosh, K.; Perlíková, P.; Havlicek, V.; Yang, C.; Pohl, R.; Tloušťová, E.; Hodek, J.; Gurska, S.; Džubák, P.; Hajdúch, M.; et al. Isomeric Naphtho-Fused 7-Deazapurine Nucleosides and Nucleotides: Synthesis, Biological Activity, Photophysical Properties and Enzymatic Incorporation to Nucleic Acids. European Journal of Organic Chemistry 2018, No. 37, 5092-5108 DOI: 10.1002/ejoc.201800165.
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Riedl, J.; Pohl, R.; Ernsting, N. P.; Orság, P.; Fojta, M.; Hocek, M. Labelling of nucleosides and oligonucleotides by solvatochromic 4-aminophthalimide fluorophore for studying DNA–protein interactions. Chemical Science 2012, 3 (9), 2797 DOI: 10.1039/c2sc20404e.
Trautner, S.; Jašík, J.; Parigger, C. G.; Pedarnig, J. D.; Spendelhofer, W.; Lackner, J.; Veis, P.; Heitz, J. Laser-induced optical breakdown spectroscopy of polymer materials based on evaluation of molecular emission bands. Spectrochimica Acta Part a-Molecular and Biomolecular Spectroscopy 2017, 174, 331-338 DOI: 10.1016/j.saa.2016.11.045.
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