Publications

Hrdina, R.; Dračínský, M.; Valterová, I.; Hodačová, J.; Císařová, I.; Kotora, M. New pathway to C-2-Symmetric atropoisomeric bipyridine N,N '-Dioxides and solvent effect in enantioselective allylation of aldehydes. Advanced Synthesis & Catalysis 2008, 350 (10), 1449-1456 DOI: 10.1002/adsc.200800141.

Machara, A.; Kurfürst, M.; Kozmı́k, V.; Petřı́čková, H.; Dvořáková, H.; Svoboda, J. A nonconcerted cycloaddition of fused 2-vinylthiophenes with dimethyl acetylenedicarboxylate. Tetrahedron Letters 2004, 45 (10), 2189-2192 DOI: 10.1016/j.tetlet.2004.01.030.

Benkovics, G.; Afonso, D.; Darcsi, A.; Beni, S.; Conoci, S.; Fenyvesi, E.; Szente, L.; Malanga, M.; Sortino, S. Novel beta-cyclodextrin-eosin conjugates. Beilstein Journal of Organic Chemistry 2017, 13, 543-551 DOI: 10.3762/bjoc.13.52.

Kielkowski, P.; Brock, N. L.; Dickschat, J. S.; Hocek, M. Nucleobase Protection Strategy for Gene Cloning and Expression. ChemBioChem 2013, 14 (7), 801-804 DOI: 10.1002/cbic.201300127.

Chvojka, T.; Holec, T.; Jelinek, I.; Nemec, I.; Jindrich, J.; Lorenc, M.; Koutnikova, J.; Kral, V.; Dian, J. Optical porous silicon based sensors with chemically modified surface for detection of organic vapors. Photonics, Devices, and Systems II 2003, 5036, 51-56.

Ducháčková, L.; Kadlcikova, A.; Kotora, M.; Roithová, J. Oxygen Superbases as Polar Binding Pockets in Nonpolar Solvents. Journal of the American Chemical Society 2010, 132 (36), 12660-12667 DOI: 10.1021/ja103744f.

Císařová, I.; David, T.; Dračínský, M.; Jirák, D.; Jurok, R.; Kretschmer, J.; Kuchař, M.; Polášek, M.; Socha, O.; Vít, M. Paramagnetic encoding of molecules. Nature Communications [online] 2022, 13 (1), nestránkováno.

Císařová, I.; David, T.; Dračínský, M.; Jirák, D.; Jurok, R.; Kretschmer, J.; Kuchař, M.; Polášek, M.; Socha, O.; Vít, M. Paramagnetic encoding of molecules. Nature Communications [online] 2022, 13 (1), nestránkováno.

Eignerová, B.; Dračínský, M.; Kotora, M. Perfluoroalkylation through Cross-Metathesis between Alkenes and (Perfluoroalkyl)propenes. European Journal of Organic Chemistry 2008, 2008 (26), 4493-4499 DOI: 10.1002/ejoc.200800230.

Trojan, T.; Jindrich, J.; Vrkoslav, V.; Jelinek, I.; Dian, J. Permethylated 6(I)-alkenoylamino-6(I)-deoxy beta-cyclodextrin derivatives as modifiers of photoluminescence sensor response of porous silicon. Journal of Inclusion Phenomena and Macrocyclic Chemistry 2007, 57 (1-4), 343-348 DOI: 10.1007/s10847-006-9260-5.

Nakatani, K.; Tor, Y.; Dadová, J.; Cahová, H.; Hocek, M. Polymerase Synthesis of Base-Modified DNA; Springer International Publishing: Cham, 2016; Vol. 31, pp 123-144.

Dziuba, D.; Pohl, R.; Hocek, M. Polymerase synthesis of DNA labelled with benzylidene cyanoacetamide-based fluorescent molecular rotors: fluorescent light-up probes for DNA-binding proteins. Chem. Commun. 2015, 51 (23), 4880-4882 DOI: 10.1039/C5CC00530B.

Ren, S.; Bojdys, M. J.; Dawson, R.; Laybourn, A.; Khimyak, Y. Z.; Adams, D. J.; Cooper, A. I. Porous, Fluorescent, Covalent Triazine-Based Frameworks Via Room-Temperature and Microwave-Assisted Synthesis. Advanced Materials 2012, 24 (17), 2357-2361 DOI: 10.1002/adma.201200751.

Vrkoslav, V.; Jelinek, I.; Trojan, T.; Jindrich, J.; Dian, J. Porous silicon with beta-cyclodextrin modified surface for photoluminescence sensing of organic molecules in gas and liquid phase. Physica E: Low-dimensional Systems & Nanostructures 2007, 38 (1-2), 200-204 DOI: 10.1016/j.physe.2006.12.052.

Machara, A.; Kozmík, V.; Pojarová, M.; Dvořáková, H.; Svoboda, J. Preparation and rearrangement study of novel thiophenium- and selenophenium-ylides. Collection of Czechoslovak Chemical Communications 2009, 1 DOI: 10.1135/cccc2009001.

Popr, M.; Filippov, S. K.; Matushkin, N.; Dian, J.; Jindřich, J. Properties of cationic monosubstituted tetraalkylammonium cyclodextrin derivatives – their stability, complexation ability in solution or when deposited on solid anionic surface. Beilstein Journal of Organic Chemistry 2015, 11, 192-199 DOI: 10.3762/bjoc.11.20.

Džubák, P.; Gurska, S.; Hajdúch, M.; Hocek, M.; Pohl, R.; Tloušťová, E.; Veselovská, L. Pyrido-Fused Deazapurine Bases: Synthesis and Glycosylation of 4-Substituted 9H-Pyrido[2',3':4,5]- and Pyrido[4',3':4,5]pyrrolo[2,3-d]pyrimidines. ACS Omega [online] 2020, 5 (40), 26278-26286 DOI: 10.1021/acsomega.0c04302.

Dračínský, M.; Castaño, O.; Kotora, M.; Bouř, P. Rearrangement of Dewar Benzene Derivatives Studied by DFT. The Journal of Organic Chemistry 2010, 75 (3), 576-581 DOI: 10.1021/jo902065n.

Bastien, G.; Císařová, I.; Dračínský, M.; Hurtado, C. Santos; Kaleta, J.; Mašát, M.; Rogers, C. T.; Rončević, I.; Štoček, J. Radek. Regular Two-Dimensional Arrays of Surface-Mounted Molecular Switches: Switching Monitored by UV-vis and NMR Spectroscopy. Journal of the American Chemical Society 2020, 142 (20), 9337-9351 DOI: 10.1021/jacs.0c01753.

Dziuba, D.; Jurkiewicz, P.; Cebecauer, M.; Hof, M.; Hocek, M. A Rotational BODIPY Nucleotide: An Environment-Sensitive Fluorescence-Lifetime Probe for DNA Interactions and Applications in Live-Cell Microscopy. Angewandte Chemie International Edition 2016, 55 (1), 174-178 DOI: 10.1002/anie.201507922.

Dziuba, D.; Pospíšil, P.; Matyašovský, J.; Brynda, J.; Nachtigallová, D.; Rulíšek, L.; Pohl, R.; Hof, M.; Hocek, M. Solvatochromic fluorene-linked nucleoside and DNA as color-changing fluorescent probes for sensing interactions. Chem. Sci. 2016, 7 (9), 5775-5785 DOI: 10.1039/C6SC02548J.

Císařová, I.; Dočekal, V.; Gyepes, R.; Hrabovský, J.; Koberová, T.; Rios, R.; Veselý, J.; Vopálenská, A. Stereoselective cyclopropanation of boron dipyrromethene (BODIPY) derivatives by an organocascade reaction. Advanced Synthesis and Catalysis 2022, 364 (5), 930-937.

Snášel, J.; Nauš, P.; Dostál, J.; Hnízda, A.; Fanfrlík, J.; Brynda, J.; Bourderioux, A.; Dušek, M.; Dvořáková, H.; Stolaříková, J.; et al. Structural Basis for Inhibition of Mycobacterial and Human Adenosine Kinase by 7-Substituted 7-(Het)aryl-7-deazaadenine Ribonucleosides. Journal of Medicinal Chemistry 2014, 57 (20), 8268-8279 DOI: 10.1021/jm500497v.

Snášel, J.; Nauš, P.; Dostál, J.; Hnízda, A.; Fanfrlík, J.; Brynda, J.; Bourderioux, A.; Dušek, M.; Dvořáková, H.; Stolaříková, J.; et al. Structural Basis for Inhibition of Mycobacterial and Human Adenosine Kinase by 7-Substituted 7-(Het)aryl-7-deazaadenine Ribonucleosides. Journal of Medicinal Chemistry 2014, 57 (20), 8268-8279 DOI: 10.1021/jm500497v.

Snášel, J.; Nauš, P.; Dostál, J.; Hnízda, A.; Fanfrlík, J.; Brynda, J.; Bourderioux, A.; Dušek, M.; Dvořáková, H.; Stolaříková, J.; et al. Structural Basis for Inhibition of Mycobacterial and Human Adenosine Kinase by 7-Substituted 7-(Het)aryl-7-deazaadenine Ribonucleosides. Journal of Medicinal Chemistry 2014, 57 (20), 8268-8279 DOI: 10.1021/jm500497v.